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KRSMS March 2007

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KR/SMS Annotation & Domain-Extension Ontology Meeting

Meeting Date and Location

  • April 4-6, 2007
  • NCEAS, Santa Barbara

Meeting Goals

  • Annotate a select corpus of data sets based on OBOE
  • Define domain extensions (ontologies for entities, characteristics, units) needed for annotating the corpus

Target Data sets

Data and MetadataPublisherComment
PLT-GCEM-0511aGCEPlant Ecology: Biomass from Shoot Height and Flowering Status
PLT-GCEM-0511bGCEPlant Ecology: Biomass from Shoot Height and Flowering Status (w/ Biomass)
PLT-GCED-0409GCEPlant Ecology: Community Response to Fertilization
PLT-GCET-0608GCEPlant Ecology: Plant Richness Survey
INS-GCEM-0511GCETerrestrial Insect Ecology: Grasshopper Abundance and Species Diversity
INV-GCEM-0511GCEAquatic Invertebrate Ecology: Crab Abundance based on Crab Hole Counts
INV-GCEM-0501a1GCEAquatic Invertebrate Ecology: Infaunal and Epifaunal Mollusc Abundance
INV-GCEM-0501a2GCEAquatic Invertebrate Ecology: Infaunal and Epifaunal Mollusc Size Distributions
FNG-GCEM-0401GCEFungal Productivity: Ergosterol Content and Ascospore Release Rates
BCT-GCEM-0511a2GCEBacterial Productivity: Surface Water Bacterial Productivity
PHP-GCEM-0511aGCEPhytoplankton Productivity: Surface Water Phytoplankton Productivity
ALG-GCED-0304aGCEAlgal Productivity: Benthic Chlorophyll Concentrations and Gross Oxygenic Photosynthesis Rates
ALG-GCED-0304cGCEAlgal Productivity: Benthic Chlorophyll, Density, Porosity, Organic Content Concentrations, and Gross Oxygenic Photosynthesis Rates
MET-GCEM-0508aGCEMeteorology: Annual Summaries of Daily Air Temperature and Precipitation
HYD-GCES-0508aGCEHydrography: Annual Summaries of Daily Averaged River Discharge
HYD-GCES-0508bGCEHydrography: Monthly Mean Water Levels

PHY-GCEM-0612aGCEContinuous Salinity, Temperature and Depth
PHY-GCEM-0406a1GCEPhysical Oceanography: Bin-Averaged CTD Profiles
PHY-GCEM-0302a2GCEPhysical Oceanography: CTD, PAR, Oxygen, and Chlorophyll Profiles

GEL-GCEM-0508aGCEGeology: Soil Characteristics
GEL-GCEM-0508bGCEGeology: Soil Surface Elevation
GEL-GCEM-0508cGCEGeology: Soil Accretion
ORG-GCEM-0511aGCEOrganic Matter/Decomposition: Surface Water Dissolved Organic Carbon Concentrations
ORG-GCEM-0508aGCEOrganic Matter/Decomposition: Soil temperature and respiration
ORG-GCEM-0508bGCEOrganic Matter/Decomposition: Rates of Decompisition and Root In-Growth
CHM-GCED-0303aGCEChemistry: Surface Water Samples for Total Dissolved Inorganic Carbon, Total Alkalinity, and pH

POR-GCED-0210GCEPore-water Chemistry: Porewater Nutrients, Dissolved Organics, Redox Species, and Gasses in Estuarine Intertidal Sediments

Notes:

  • The majority of types of GCE Web-accessible datasets are represented above

Domain Ontology, Thesaurus, and Glossary Examples, Related Work

Participants:

  • Shawn Bowers, UC Davis
  • Josh Madin, UC Santa Barbara
  • Deana Pennington, Univ. of New Mexico
  • Mark Schildhauer, UC Santa Barbara
  • ...


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This particular version was published on 21-Mar-2007 12:01:58 PDT by uid=bowers,o=SDSC.