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TOSAPI Signatures
Your trail: EScienceLinkUpOct04 | SDSCWeeklyMeetings | KBISMeetingNotes | TaxonSMSApril04PrototypeNotes | ENMPipelineConferenceCall20Oct2004 | ENMPipelineConferenceCall14Sep2004 | KeplerConferenceCallNotes19Aug2004 | IdentifiersInKepler | AHM_May2006_Taxon | TaxonTaskList

Difference between version 22 and version 10:

Lines 1-2 were replaced by lines 1-2
- !! Disclaimer
- These APIs will change slightly by early Dec 2004 - do not code directly to them now! I will add a link to the code documentation for complete object descriptions at that time. For the time being, look at the TCS.
+ !! Informational APIs (to get parameters for other queries)
+ * AAlgorithmMetaArray __getAlgorithmMetadata__() throws java.rmi.RemoteException
Lines 4-5 were replaced by line 4
- !! Current Query APIs using simple lookup
- * CConcept __getConcept__(String sConceptID, int iHierarchyID, boolean bUseCacheFlag) throws CDBException, CConceptException, SQLException
+ * StringArray __getAlgorithmNames__() throws java.rmi.RemoteException
Line 7 was replaced by line 6
- * CRelationshipInfo __findRelatedConcepts__(String conceptGuid, String relationshipType, boolean includeAssertions, boolean useCache) throws CTOSException
+ * void __getAlgorithmDetails__(String algorithmName, StringHolder author, StringHolder description) throws java.rmi.RemoteException
Line 9 was replaced by line 8
- * float __measureRelationship__(String sConceptID1, String sConceptID2, int[] oHierarchyIDs, String sRelationshipType, int iDistance, boolean bUseCacheFlag) throws SQLException, CDBException, CConceptException, IllegalArgumentException
+ * CAuthorityArray __getAuthorities__() throws java.rmi.RemoteException
Line 11 was replaced by line 10
- * CNode[] __getTree__(String sConceptID, String sXMLDesc, int iHierarchyID, boolean bUseCacheFlag) throws CDBException, SQLException
+ * StringArray __getAuthorityNames__() throws java.rmi.RemoteException
Lines 13-14 were replaced by line 12
- !! Current Query APIs using Matching
- * CWeightedConcept[] __findConcepts__(CConcept taxonQuery, String algorithm, float threshold, boolean useCache) throws CTOSException
+ * void __getAuthorityDetails__(String authorityName, StringHolder revision, StringHolder description, StringHolder termsOfUse) throws java.rmi.RemoteException
Lines 16-17 were replaced by lines 14-15
- !! Current Modification APIs
- * String __addConcept__(CConcept concept) throws CTOSException
+ !! Query APIs using simple lookup
+ * CConcept __getConcept__(String conceptGuid) throws java.rmi.RemoteException
Line 19 was replaced by line 17
- * String __addRelationship__(String fromGuid, String toGuid, String relationshipType, CAccordingTo accTo) throws CTOSException
+ * CTaxonName __getName__(String nameGuid) throws java.rmi.RemoteException
Line 21 was replaced by line 19
- * CConceptIDPair[] __enterProviderData__(String sTESPath, int iHierarchyID) throws CTOSException, SQLException, CParserException
+ * CSpecimen __getSpecimen__(String specimenGuid) throws java.rmi.RemoteException
Lines 23-24 were replaced by lines 21-43
- !! Informational APIs (to get parameters for other queries)
- * AAlgorithmMeta[] __getAlgorithmMetadata__() throws CTOSException
+ * StringArray __getSynonymousNames__(String conceptGuid) throws java.rmi.RemoteException
+
+ * CRelationshipInfo __findRelatedConcepts__(String conceptGuid, String relationshipType, boolean includeAssertions, boolean useCache) throws java.rmi.RemoteException
+
+ * void __findRelatedConceptGuids__(String conceptGuid, String relationshipType, boolean includeAssertions, boolean useCache, StringHolderArray arrGuids, StringHolderArray arrRelTypes) throws java.rmi.RemoteException
+
+ * void __getBestConcept__(String name, String authorityName, StringHolderArray arrGuids, FloatHolderArray arrScores) throws CTOSException
+
+ * StringArray __getAuthoritativeList__(CAuthority auth, String conceptGuid, String targetRankCode) throws java.rmi.RemoteException
+
+ * CConceptArray __getHigherTaxon__(CTaxonName name, String targetRankCode, CAuthority authority) throws java.rmi.RemoteException
+
+ * StringArray __getHigherTaxonName__(String name, String targetRankCode, String authorityName) throws java.rmi.RemoteException
+
+ !! Query APIs using Algorithm Matching
+ * CWeightedConceptArray __findConcepts__(CConcept taxonQuery, String algorithm, float threshold, boolean useCache) throws java.rmi.RemoteException
+
+ !! Modification APIs (may not be publicly/universally accessible)
+ * String __addConcept__(CConcept concept) throws java.rmi.RemoteException
+
+ * String __addRelationship__(String fromGuid, String toGuid, String relationshipType, CAccordingTo accTo) throws java.rmi.RemoteException
+
+

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This material is based upon work supported by the National Science Foundation under award 0225676. Any opinions, findings and conclusions or recomendations expressed in this material are those of the author(s) and do not necessarily reflect the views of the National Science Foundation (NSF).

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Arizona State University Napier University University of North Carolina University of Vermont
 
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Copyright 2004 Partnership for Biodiversity Informatics, University of New Mexico, The Regents of the University of California, and University of Kansas