Science Environment for Ecological Knowledge
Ecoinformatics site parent site of Partnership for Biodiversity Informatics site parent site of SEEK - Home
Science Environment for Ecological Knowledge








 

 

 

TOSAPI Signatures
Your trail: EScienceLinkUpOct04 | SDSCWeeklyMeetings | KBISMeetingNotes | TaxonSMSApril04PrototypeNotes | ENMPipelineConferenceCall20Oct2004 | ENMPipelineConferenceCall14Sep2004 | KeplerConferenceCallNotes19Aug2004 | IdentifiersInKepler | AHM_May2006_Taxon | TaxonTaskList

Difference between version 22 and version 11:

Lines 1-2 were replaced by lines 1-2
- !! Disclaimer
- These APIs will change slightly by early Dec 2004 - do not code directly to them now! I will add a link to the code documentation for complete object descriptions at that time. For the time being, look at the TCS.
+ !! Informational APIs (to get parameters for other queries)
+ * AAlgorithmMetaArray __getAlgorithmMetadata__() throws java.rmi.RemoteException
Lines 4-5 were replaced by line 4
- !! Current Query APIs using simple lookup
- * CConcept __getConcept__(String conceptGuid) throws CTOSException
+ * StringArray __getAlgorithmNames__() throws java.rmi.RemoteException
Line 7 was replaced by line 6
- * CRelationshipInfo __findRelatedConcepts__(String conceptGuid, String relationshipType, boolean includeAssertions, boolean useCache) throws CTOSException
+ * void __getAlgorithmDetails__(String algorithmName, StringHolder author, StringHolder description) throws java.rmi.RemoteException
Line 9 was replaced by line 8
- * CWeightedConcept[] __getBestConcept__(CTaxonName name, CAuthority auth) throws CTOSException
+ * CAuthorityArray __getAuthorities__() throws java.rmi.RemoteException
Line 11 was replaced by line 10
- * String[] __getAuthoritativeList__(CAuthority auth, String conceptGuid, String targetRankCode) throws CTOSException
+ * StringArray __getAuthorityNames__() throws java.rmi.RemoteException
Line 13 was replaced by line 12
- * CConcept[] __getHigherTaxon__(CTaxonName name, String targetRankCode, CAuthority authority) throws CTOSException
+ * void __getAuthorityDetails__(String authorityName, StringHolder revision, StringHolder description, StringHolder termsOfUse) throws java.rmi.RemoteException
Line 15 was replaced by lines 14-15
- * CTaxonName __getName__(String nameGuid) throws CTOSException
+ !! Query APIs using simple lookup
+ * CConcept __getConcept__(String conceptGuid) throws java.rmi.RemoteException
Lines 17-18 were replaced by line 17
- !! Current Query APIs using Algorithm Matching
- * CWeightedConcept[] __findConcepts__(CConcept taxonQuery, String algorithm, float threshold, boolean useCache) throws CTOSException
+ * CTaxonName __getName__(String nameGuid) throws java.rmi.RemoteException
Lines 20-21 were replaced by line 19
- !! Current Modification APIs
- * String __addConcept__(CConcept concept) throws CTOSException
+ * CSpecimen __getSpecimen__(String specimenGuid) throws java.rmi.RemoteException
Line 23 was replaced by line 21
- * String __addRelationship__(String fromGuid, String toGuid, String relationshipType, CAccordingTo accTo) throws CTOSException
+ * StringArray __getSynonymousNames__(String conceptGuid) throws java.rmi.RemoteException
Line 25 was replaced by line 23
- * CConceptIDPair[] __enterProviderData__(String sTESPath, int iHierarchyID) throws CTOSException, SQLException, CParserException
+ * CRelationshipInfo __findRelatedConcepts__(String conceptGuid, String relationshipType, boolean includeAssertions, boolean useCache) throws java.rmi.RemoteException
Lines 27-28 were replaced by lines 25-42
- !! Informational APIs (to get parameters for other queries)
- * AAlgorithmMeta[] __getAlgorithmMetadata__() throws CTOSException
+ * void __findRelatedConceptGuids__(String conceptGuid, String relationshipType, boolean includeAssertions, boolean useCache, StringHolderArray arrGuids, StringHolderArray arrRelTypes) throws java.rmi.RemoteException
+
+ * void __getBestConcept__(String name, String authorityName, StringHolderArray arrGuids, FloatHolderArray arrScores) throws CTOSException
+
+ * StringArray __getAuthoritativeList__(CAuthority auth, String conceptGuid, String targetRankCode) throws java.rmi.RemoteException
+
+ * CConceptArray __getHigherTaxon__(CTaxonName name, String targetRankCode, CAuthority authority) throws java.rmi.RemoteException
+
+ * StringArray __getHigherTaxonName__(String name, String targetRankCode, String authorityName) throws java.rmi.RemoteException
+
+ !! Query APIs using Algorithm Matching
+ * CWeightedConceptArray __findConcepts__(CConcept taxonQuery, String algorithm, float threshold, boolean useCache) throws java.rmi.RemoteException
+
+ !! Modification APIs (may not be publicly/universally accessible)
+ * String __addConcept__(CConcept concept) throws java.rmi.RemoteException
+
+ * String __addRelationship__(String fromGuid, String toGuid, String relationshipType, CAccordingTo accTo) throws java.rmi.RemoteException
+
Removed line 30
- * CAuthority[] __getAuthorities__() throws CTOSException

Back to TOSAPI Signatures, or to the Page History.


This material is based upon work supported by the National Science Foundation under award 0225676. Any opinions, findings and conclusions or recomendations expressed in this material are those of the author(s) and do not necessarily reflect the views of the National Science Foundation (NSF).

LTER Logo
Long Term Ecological Research Network, UNM National Center for Ecological Analysis and Synthesis, UCSB Biodiversity Research Center, KU San Diego Supercomputer Center, UCSD
 
Arizona State University Napier University University of North Carolina University of Vermont
 
UC Davis Genome Center

Copyright 2004 Partnership for Biodiversity Informatics, University of New Mexico, The Regents of the University of California, and University of Kansas