SEEK-Wiki: E Science Link Up Oct 04

-SEEK-Home
About SEEK
Tools
Education
Publications
Opportunities
Community
About This Site
Calendar
+            E Science Link Up Oct 04
         
          
            Your trail: EcoGridConferenceCallNotes7Sep2004 | EcoGridConferenceCallNotes17Sep2004 | KRSMSMeasurement | SparrowLanguage | SemanticsInKepler | KRSMSOntoCreationGuide | SMSServiceInterfaces | KRSMSSemanticAnnotationLanguage | SMSHotTopics | AllHandsMeetingSMSNotesNov04
         
      

      

      

      
         



      
          Difference between 
          version 42 
          and 
          version 41:
          

          
At line 209 added 12 lines.
+ * Adam Birnbaum
+ ** Resurgence project
+ ** encyclopedia of life (eol) : automated annotations for all of the know protein sequences; slurp 1.5 million things out of a db, and push through seven to ten programs
+ ** both want to have some kind of simple visual prog. screen, see nothing but icons relevant to their field, setup the workflow, say go, and do it 1.5 mill times / domain specific tools/icons, and say go repeatedly
+ ** need constraints among icons: outputs and inputs
+ ** template workflows, default settings, etc.
+ ** check validity of resulting configurations / workflows
+ ** what is meant here by high throughput, thousands of tasks per month (not flops), 1.5 mill jobs over 6 month period, e.g.
+ ** scientist wants to run many times, varying the inputs
+ ** apst and nimrod (tested with these)
+ ** pegasus in same category
+


          

      

      

      
      Back to E Science Link Up Oct 04,
       or to the Page History.
 E Science Link Up Oct 04
 Your trail: EcoGridConferenceCallNotes7Sep2004 | EcoGridConferenceCallNotes17Sep2004 | KRSMSMeasurement | SparrowLanguage | SemanticsInKepler | KRSMSOntoCreationGuide | SMSServiceInterfaces | KRSMSSemanticAnnotationLanguage | SMSHotTopics | AllHandsMeetingSMSNotesNov04
 At line 209 added 12 lines.
++ * Adam Birnbaum
++ ** Resurgence project
++ ** encyclopedia of life (eol) : automated annotations for all of the know protein sequences; slurp 1.5 million things out of a db, and push through seven to ten programs
++ ** both want to have some kind of simple visual prog. screen, see nothing but icons relevant to their field, setup the workflow, say go, and do it 1.5 mill times / domain specific tools/icons, and say go repeatedly
++ ** need constraints among icons: outputs and inputs
++ ** template workflows, default settings, etc.
++ ** check validity of resulting configurations / workflows
++ ** what is meant here by high throughput, thousands of tasks per month (not flops), 1.5 mill jobs over 6 month period, e.g.
++ ** scientist wants to run many times, varying the inputs
++ ** apst and nimrod (tested with these)
++ ** pegasus in same category
++

This material is based upon work supported by the National Science Foundation under award 0225676. Any opinions, findings and conclusions or recomendations expressed in this material are those of the author(s) and do not necessarily reflect the views of the National Science Foundation (NSF).


Long Term Ecological Research Network, UNM	National Center for Ecological Analysis and Synthesis, UCSB	Biodiversity Research Center, KU	San Diego Supercomputer Center, UCSD


Arizona State University	Napier University	University of North Carolina	University of Vermont


UC Davis Genome Center

Copyright 2004 Partnership for Biodiversity Informatics, University of New Mexico, The Regents of the University of California, and University of Kansas