| At line 331 added 44 lines. |
| + |
| + !Breakout: myGrid "Data Model" (schema) for capturing Metadata and Semantics |
| + |
| + * common.xsd |
| + ** service description |
| + *** serviceName |
| + *** organisation |
| + **** UDDI fields, e.g., organization name, etc. |
| + *** author |
| + *** locationURL |
| + *** interfaceWSDL |
| + *** serviceDescriptionText |
| + *** operations (units of funtionality) |
| + **** service operation |
| + ***** operation name |
| + ***** portName |
| + ***** operationDescriptionText |
| + ***** operationInputs |
| + ****** parameter |
| + ******* parameterName |
| + ******* messageName |
| + ******* parameterDescription |
| + ******* defaultValue |
| + ******* semanticType |
| + ******* XMLSchemaURI |
| + ******* isConfigurationParameter |
| + ***** operationOutputs |
| + ***** operationTask (the "what", i.e., what the operation does -- the verb or action -- e.g., "aligning, ncbi_blast_local_aligning, etc.") |
| + ***** operationResource (underlying resources that the operation may use, like a database, coming from an ontology...) |
| + ***** operationMethod |
| + ***** operationApplication (software application) |
| + *** serviceType |
| + **** either: "Soaplab service, WSDL service, Workflow service" |
| + ** pedro |
| + *** uses this schema to drive the user interface for annotation |
| + *** also uses an external xml file to state that certain xml schema elements are to be filled in by semantic types, and where to look in the ontologies to fill those concepts |
| + *** [http://www.cs.man.ac.uk/~penpecip/feta/misc] for files ... |
| + |
| + !More on SHIMs and Planning |
| + |
| + * Shims in detail: UniProt database to BLASTp analysis |
| + ** UniProt produces concrete type: UniProt_record |
| + ** contains protein_sequence |
| + ** |
