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SEEK All Hands Meeting 20021113

November 13-16, 2002 Spencer Research Library University of Kansas Lawrence, Kansas

Meeting schedule:

Wednesday November 13
evening Arrive Wednesday afternoon/evening at MCI, drive/shuttle to Lawrence (1 hour)
7:00 pm Early bird, informal dinner @ Tellers Restaurant, Massachusetts Street and 8th
Thursday November 14
7:45 am Coffee and continental breakfast, Spencer Research Library
8:00 Welcome Beach; Krishtalka; Research Librarian
Introductions
Overview of SEEK vision from a community perspective Michener
Summary of proposed SEEK activities and architecture Jones
10:00 Break
10:30 Presentations (12 x 5 minutes each) on relevance of existing projects to SEEK development. Limit 5 slides/ 5 minutes + couple minutes discussion
The Knowledge Network for Biocomplexity (KNB) Jones
Xanthoria/ClimDB McCartney
Ontology-Based Classification Gauch
Storage Resource Broker: A Brief Introduction Rajasekar
Semantic Mediation and Scientific Workflows Ludaescher
Integrating modelling architecture: ontologies for cross-scale, cross-paradigm natural system modelling Villa
The Prometheus approach to multiple classifications Kennedy
Spatiotemporal Extrapolation of Ecological Knowledge Pennington
LTER Informatics Activities Brunt
The VegBank taxonomic data model Peet
Access to Distributed Collections Vieglais
Massive ecological data analysis and visualization Stockwell
Modeling Complex Biodiversity Phenomena Using Informatics Tools Peterson
12:20 Meeting Structure and Objectives Michener
12:30 Lunch in building, 20-minute tour of natural history library
2:00 Breakout groups (2.5 hours meeting, 1/2 hour break at 3:30 pm, 10 minute report, 20 minute discussion)
EcoGrid
-Identify existing data network efforts to consider for interoperation
-Identify actual target networks for this project
-Candidate functionality/features with milestones/timelines
-Identify other relevant grid activities
-Discussion of architectural approaches
-User interfaces
-Desired roles/participation
-Identify possible people for membership/participation
-How to best leverage efforts in community?
-Personnel & hiring
Rajasekar
Biodiversity and Ecological Analysis and Modeling WG
-End user groups, driver users
-Prototype hi-visibility questions; building blocks biodiversity and ecology dynamics
-How to best link with BEAM, and other 2 WGs
-Data discovery/availability
-Identify information & data needs
-Identify leveraging groups (eg LIDET, TRAGNET)
-Identify possible people for membership/participation
-Personnel & hiring
Michener
6:00 Reception and dinner in building
Friday November 15
7:45 am Coffee and continental breakfast, Spencer Research Library
8:30 Breakout groups (2.5 hours meeting, 1/2 hour break at 10:00 am, 10 minute report, 20 minute discussion)
Semantic Mediation System
-Identify existing ontologies/terminologies
---How used today by community, availability (book, CD?)
-High-level scenarios/use cases for semantic mediation
-Candidate functionality/features with milestones/timelines
-What role does SM play in dynamic integration and discovery of data? (when integrated view not put together ahead of time)
-What infrastructure needed to assist KR/Ontology WG?
-Identify possible people for membership/participation
-How to best leverage efforts in community?
-Personnel & hiring
Ludaescher
Taxonomy WG
-Identify existing projects & models for concept-based taxon
-Identify requirements for classification data architecture
-Consider alternatives to concept-based taxon?
---Do concept-based taxonomies actually solve a problem?
-How can classification architecture contribute to A&M & Ecogrid
-Shoud we accommodate P-code & alternate naming systems, and if so, how?
-End-user tools to manipulate classification trees
-Discuss overlap with SM
-How to populate such an ambitious DB
-Identify possible people for membership/participation
-How to best leverage efforts in community?
-Personnel & hiring
Beach
12:30 Lunch in building
2:00 - 5:30 Breakout groups (2 hours meeting, 1/2 hour break at 3:30 pm, 10 minute report, 20 minute discussion)
Analysis and Modeling System
-Identify existing systems that are relevant (e.g., Ptolemy, Pipeline Pilot)
-High-level scenarios/use cases for semantic mediation
-Candidate functionality/features with milestones/timelines
-What infrastructure is required for DAM WG
-User interfaces
-Identify possible people for membership/participation
-How to best leverage efforts in community?
-Personnel & hiring
Jones
Knowledge Representation WG
-What will useful ontologies be for A&M and SEEK in general
-Identify existing controlled vocabularies that can be leveraged
-To what extent can ontology generation be automated?
-Level of formalism and expressiveness needed for SM
-End-user tools to develop & modify ontologies
-End-user tools to expose ontologies to domain scientist
-Tools/metrics for relevance
-Prioritize products and milestones (deliver ontology to SM)
-Identify possible people for membership/participation
-How to best leverage efforts in community?
-Personnel & hiring
Schildhauer
6:00 Group dinner at local microbrewery
Saturday November 16
7:45 am Coffee and continental breakfast, Spencer Research Library
8:30 Discussion of overall SEEK vision/plan; unresolved issues; collaboration techniques and tools; exposing SEEK to broader community
11:30 Meeting adjourns
12:30 Lunch on your own, or depart Lawrence after 12:30. Need to leave Lawrence 2 hours before flight. United, USAir, AmerWest, Southwest (MCI)

Participants

James Beach KUNHM
Chad Berkley NCEAS
Matthew Brooke NCEAS
James Brunt UNM
Scott Downie KUNHM
Susan Gauch KU EECS
John Harris NCEAS
Dan Higgins NCEAS
Chris Jones UCSB
Matt Jones NCEAS
Jesse Kennedy Napier Univ.
Meg Kumin KUNHM
Bertram Ludaescher SDSC
Peter McCartney Arizona
William Michener UNM
Tim Noble KUNHM
Robert Peet UNC
Deanna Pennington UNM
Town Peterson KUNHM
Arcot Rajaseka SDSC
Mark Schildhauer NCEAS
Aimee Stewart KUNHM
David Stockwell SDSC
Jing Tao NCEAS
Paul Tooby SDSC
Kristin Vanderbilt UNM
Dave Vieglais KUNHM
Ferdinando Villa Univ. of Vermont
Greg Vorontsov KUNHM
Robert Waide UNM
Rich Williams NCEAS

Background

General

Scientific Workflow, Analysis, Computational Grids

Semantic Mediation

Data Networks

Taxonomy and Nomenclature

Knowledge Representation



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This page last changed on 27-May-2004 15:32:54 PDT by stekell.