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SMS_KR_Taxon Developers Meeting May 2005

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Logistics

Where: Estes Park, CO
Hotel: Information to be provided
When: May 1-6, 2005
Weather: Historical Current

Overview

This meeting is for the full development group and other related individulas from the SEEK project to focus on design and implementation. There will be no overview, as participants are assumed to be fully familiar with the project. The SEEK developers will meet to discuss 1) design and implementation of semantically-aware services within Kepler, and 2) design and implementation of the SEEK taxon name and concept services. These two groups will meet in parallel sessions. The SMS/KR/Kepler focus is largely centered around the proposed functionality that we wrote up in our SSDBM 2005 submission. Please read that and other SMS background papers before the meeting.

Agenda

Sunday, May 1

  • Arrivals from Airport

Monday, May 2

  • 8:00am Coffee
  • 8:30am Welcome (Jones)
  • 9:00am Overview of meeting goals (Jones)
  • 10:00am Break
  • 10:15am - 12:00pm Kepler User Interface Design (Downey)
    • Overview presentation of new Kepler UI (Downey, 45 minutes)
    • Discussion and feedback on Kepler UI design (all, 1 hr)
      • Tasks and milestones

  • 12:00pm - 1:00pm Lunch
  • 1:00pm - 5:00pm Taxon Application Usability Interview Results from Kate Jones (Downey, Franz)
  • 1:00pm - 4:00pm Kepler Architecture (Berkley)

    • Overview of Kepler architecture as designed to support new SMS/KR/Grid activities
      • Kepler Object Manager
      • Kepler KSW archive format
      • Local Kepler Repositories (data, actors, onto's, annotations, etc.)
    • Discussion and feedback
  • 4:00pm - 5:00 pm EcoGrid Storage and Search (Jones)
    • Changes needed to EcoGrid to support storing ontologies and annotations and supporting ontology-driven search of actors, workflows, and data
  • After dinner Distributed Graduate Seminar (Romanello)
    • Discussion of running the distributed grad seminar at UNM, UCSB, UC Davis, and KU
    • Participants: Romanello, Pennington, Jones, Schildhauer, Ludaescher, Bowers, Beach, others welcome

Tuesday, May 3

  • 8:00am Coffee
  • 8:30am - 12:00pm Taxon Member Updates and Priorities (All)
  • 8:30am - 12:00pm Semantic Annotations in Kepler (Bowers)
    • Creating, editing, saving, and publishing annotations for actors, data, workflows
      • SMS backend services
      • User interface mockup
      • Ontology needs assessment
      • Tasks and milestones
  • 12:00pm - 1:00pm Lunch
  • 1:00pm - 5:00pm Taxon Usability Analysis and Process (All: w/Downey and Pereira)
  • 1:00pm - 5:00pm Actor and data classification and browsing (Berkley)
    • Classification of actors and data into categories, browsing and searching those through Kepler
      • SMS backend services
      • User interface mockup
      • Ontology needs assessment
      • Tasks and milestones
    • Ontology-directed workflow design (Berkley)
      • UI changes to allow search and browse of semantically (and structurally) compatible workflow components
      • SMS backend services
      • User interface mockup
      • Ontology needs assessment
      • Tasks and milestones
  • 5:00pm End of Taxon Subgroup Meeting

Wednesday, May 4

  • 8:00am Coffee
  • 8:30am SEEK Taxon Subgroup
  • 8:30am - 10:00am Semantic workflow validation (Bowers)
    • Running a semantic consistency check on all workflow components and data flows, providing visual indication of semantic validity for links (preferably during workflow authoring)
      • SMS backend services
      • User interface mockup
      • Ontology needs assessment
      • Tasks and milestones
  • 10:00am Break
  • 10:15am - 12:00am Ontologies (Schildhauer)
    • Overview of ontologies, how they work together, what's missing and needed
      • ontologies covering ENM and Biodiversity case study data and actors specifically
      • Ontology needs assessment
      • Tasks and milestones

  • 12:00pm - 1:00pm Lunch
  • 1:00pm - 5:00pm Semi-automated data integration (Jones)
    • Data integration (merging), use cases identified in beam biodiversity meeting
      • Concatenate two or more data sets that are semantically and structurally compatible
      • Join two or more data sets that are semantically and structurally compatible
      • Concatenate two or more data sets that are semantically but not structurally compatible
      • Join two or more data sets that are semantically but not structurally compatible
      • SMS backend services
      • User interface mockup
      • Ontology needs assessment
      • Tasks and milestones

Thursday, May 5

  • 8:00am Coffee
  • 8:30am - 12:00pm Semi-automated workflow composition (Bowers)
    • Semantically-derived transformation steps (i.e., locating and inserting one or more actors into a wf to allow two semantically compatible actors to be connected structurally)

      • SMS backend services
      • User interface mockup
      • Ontology needs assessment
      • Tasks and milestones
  • 12:00pm - 1:00pm Lunch
  • 1:00pm - 4:00pm Ontology formality and user interfaces for targeted users (Downey)
    • Complexity of presenting formal ontologies to our target users
      • Does the 'tree' representation work for our formalized ontologies
      • Can our users really be expected to assimilate the formal model presented by our ontologies
      • Can Growl, and specifically graphical extensions, help here?
  • 4:00pm - 4:30pm Wrap Up

Friday, May 6

  • Travel back to home institutions

Participants

mccartney/juyal
michener/romanello/pennington/jianting/downey
ludaescher/bowers
jones/schildhauer/berkley/higgins/tao/williams?/brooke?/harris?
villa/krivov
jennywang/bing/raja
beach/stewart/gales/gauch/peet/kennedy/liu/franz/downey/pereira

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This particular version was published on 12-Apr-2005 13:15:24 PDT by LTER.dpennington.